BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012G06LP1|AL426413
(535 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1638 628 e-180
>3x_Contig1638
Length = 14042
Score = 628 bits (307), Expect = e-180
Identities = 422/473 (89%), Gaps = 5/473 (1%)
Strand = Plus / Minus
Query: 6 gcagccaakttagcacctaggactctagaaatttccttaccgtgacttgaagtaataatc 65
|||||||| ||||||||||||||||||||||||||||||||| ||||||||| || |
Sbjct: 13024 gcagccaagttagcacctaggactctagaaatttccttaccg-gacttgaagaaaa---c 12969
Query: 66 tagggttggcatagcactgacatcgttgttctttgcwacatctggcaactcatcaacgtc 125
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 12968 tagggttggcatagcactgacatcgttgttctttgcaacatctggcaactcatcaacgtc 12909
Query: 126 aaccttcaagaaggtagctttaccctcgtattccttagcgaacttttccaacattggggc 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12908 aaccttcaagaaggtagctttaccctcgtattccttagcgaacttttccaacattggggc 12849
Query: 186 aatcatcttgcatggaccacaccaggtggcaaagaagtcgacgacgaccaacttgtcgtc 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12848 aatcatcttgcatggaccacaccaggtggcaaagaagtcgacgacgaccaacttgtcgtc 12789
Query: 246 agtcaaagccttttcgaattctgatgcggaagtwagttgagcgaccattatatatkatat 305
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| | ||
Sbjct: 12788 agtcaaagccttttcgaattcggatgcggaagtaagttgagcgaccattatatatgaaat 12729
Query: 306 tkgwtgggattgtaaatatwwattktaccttatttgatgatgatag-watttatyatatt 364
| | ||||| ||||| || ||| ||||||||||||||| ||||| | |||| | |||
Sbjct: 12728 tggaggggatagtaaagataaattgtaccttatttgatgaggatagaaagttatcagatt 12669
Query: 365 atyctttaatcaatcgtagagwcwactaaatwacctttwwwtgtwtcttwyttccttttt 424
|| | |||||||||| |||| | ||||||| |||||| ||| |||| ||||||| |
Sbjct: 12668 atccgataatcaatcgaagagacaactaaataacctttaaatgtatcttacttcctttat 12609
Query: 425 wttattttkttggttaawtatcttgtttttgactaattttttcttgcttatca 477
| || | |||||||| |||| ||||||||| ||||||| |||||| ||||
Sbjct: 12608 ataataatgttggttaaatatcgagtttttgacaaatttttgcttgctaatca 12556
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.717 1.34
Gapped
Lambda K H
1.42 0.717 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2903
Number of Sequences: 1807
Number of extensions: 2903
Number of successful extensions: 62
Number of sequences better than 1.0e-20: 1
length of query: 535
length of database: 10,358,551
effective HSP length: 16
effective length of query: 519
effective length of database: 10,329,639
effective search space: 5361082641
effective search space used: 5361082641
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.6 bits)
S1: 11 (23.0 bits)
S2: 49 (100.7 bits)